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256 events found

  • Genomic Medicine: Transforming Patient Care in Diabetes

    28 August - 25 September 2017

    Genomic Medicine: Transforming Patient Care in Diabetes https://tess.oerc.ox.ac.uk/events/genomic-medicine-transforming-patient-care-in-diabetes-e0f52f1b-dad4-4610-9346-5bcfea06a5fe Learn how developments in genomics are transforming our knowledge and treatment of conditions such as diabetes. 2017-08-28 09:00:00 UTC 2017-09-25 00:00:00 UTC University of Exeter [] [] workshops_and_courses [] []
  • EMBL-EBI Training webinar series

    1 September - 31 December 2017

    Elixir node event
    EMBL-EBI Training webinar series https://tess.oerc.ox.ac.uk/events/embl-ebi-training-webinar-series The EMBL-EBI Training webinar series is taking a short break and will return in at the end of September with new webinars. Details of upcoming webinars will be posted here soon. 2017-09-01 13:00:00 UTC 2017-12-31 13:00:00 UTC [] Melissa Burke [] [] [] []
  • Clinical Bioinformatics: Unlocking Genomics in Healthcare

    4 September - 9 October 2017

    Clinical Bioinformatics: Unlocking Genomics in Healthcare https://tess.oerc.ox.ac.uk/events/clinical-bioinformatics-unlocking-genomics-in-healthcare-17ca1755-1c83-4047-a85f-fb4ce4108782 Learn about the role of clinical bioinformaticians in healthcare and how their work is helping to realise the genomics revolution. 2017-09-04 09:00:00 UTC 2017-10-09 00:00:00 UTC The University of Manchester [] [] workshops_and_courses [] []
  • Whole Genome Sequencing: Decoding the Language of Life and Health

    11 September - 2 October 2017

    Whole Genome Sequencing: Decoding the Language of Life and Health https://tess.oerc.ox.ac.uk/events/whole-genome-sequencing-decoding-the-language-of-life-and-health-9c564e54-d3a9-4792-b98d-9f5a81f73b63 Learn how whole genome sequencing works and what it could mean for the future of healthcare with this free online course. 2017-09-11 09:00:00 UTC 2017-10-02 00:00:00 UTC Health Education England [] [] workshops_and_courses [] []
  • Genomic Technologies in Clinical Diagnostics: Molecular Techniques

    11 September - 2 October 2017

    Genomic Technologies in Clinical Diagnostics: Molecular Techniques https://tess.oerc.ox.ac.uk/events/genomic-technologies-in-clinical-diagnostics-molecular-techniques-756acb8e-13c8-4933-8a07-264069ec7b8d Learn how molecular genetic techniques are used to identify the genetic factors that contribute to the development of disease. 2017-09-11 09:00:00 UTC 2017-10-02 00:00:00 UTC St George's, University of London [] [] workshops_and_courses [] []
  • 4th Galaxy high-throughput sequencing (HTS) data analysis workshop

    18 - 22 September 2017

    4th Galaxy high-throughput sequencing (HTS) data analysis workshop https://tess.oerc.ox.ac.uk/events/4th-galaxy-high-throughput-sequencing-hts-data-analysis-workshop 2017-09-18 09:00:00 UTC 2017-09-22 00:00:00 UTC [] [] [] [] []
  • 5th International Summer School/BYOD event around Rare Disease & Orphan Drug Registries

    18 - 22 September 2017

    Rome, Italy

    5th International Summer School/BYOD event around Rare Disease & Orphan Drug Registries https://tess.oerc.ox.ac.uk/events/5th-international-summer-school-byod-event-around-rare-disease-amp-orphan-drug-registries Registration is now open for the 5th International Summer School/BYOD event around Rare Disease & Orphan Drug Registries to be held 18-22 September 2017 in Rome, Italy. More information. 2017-09-18 09:00:00 UTC 2017-09-22 00:00:00 UTC Rome, Italy Rome Italy [] [] workshops_and_courses [] []
  • Cancer in the 21st Century: the Genomic Revolution

    18 September - 30 October 2017

    Cancer in the 21st Century: the Genomic Revolution https://tess.oerc.ox.ac.uk/events/cancer-in-the-21st-century-the-genomic-revolution-7bf5e9f7-3ead-4dac-8ef5-a2f87f0c0b6e Discover how genetics is revolutionising the detection and treatment of cancer, with this free online course. 2017-09-18 09:00:00 UTC 2017-10-30 00:00:00 UTC University of Glasgow [] [] workshops_and_courses [] []
  • Gentle hands-on introduction to Python programming

    18 - 25 September 2017

    Leuven, Belgium

    Elixir node event
    Gentle hands-on introduction to Python programming https://tess.oerc.ox.ac.uk/events/gentle-hands-on-introduction-to-python-programming 2017-09-18 09:30:00 UTC 2017-09-25 17:00:00 UTC VIB Bioinformatics Core Park Inn by Radisson Leuven, Leuven, Belgium Park Inn by Radisson Leuven Leuven Belgium 3010 [] [] [] [] []
  • NGS in DNA Diagnostics Course

    19 - 21 September 2017

    Erasmus MC, Netherlands

    Elixir node event
    NGS in DNA Diagnostics Course https://tess.oerc.ox.ac.uk/events/ngs-in-dna-diagnostics-course-603031f6-9788-494d-a70a-5968276c2b7a VKGL/VKGN ‘NGS in DNA diagnostics’ is a course aimed at Genomic Resequencing in a Medical Diagnostic Context, i.e to apply Next Generation Sequencing data as diagnostic tool in the hospital. Lectures will be accompanied with hands-on exploration. Program (preliminary) Day… The post NGS in DNA Diagnostics Course appeared first on Dutch Techcentre for Life Sciences. 2017-09-19 09:00:00 UTC 2017-09-21 00:00:00 UTC Erasmus MC, Rotterdam, Netherlands, Erasmus MC, Netherlands Erasmus MC, Rotterdam, Netherlands Erasmus MC Netherlands [] [] workshops_and_courses [] []
  • Basic Course in SEM and TEM

    20 - 22 September 2017

    Umeå

    Basic Course in SEM and TEM https://tess.oerc.ox.ac.uk/events/basic-course-in-sem-and-tem 2017-09-20 09:00:00 UTC 2017-09-22 17:00:00 UTC Umeå Umeå [] [] workshops_and_courses [] []
  • de.NBI, DAIS & KNIME Hackathon

    20 - 29 September 2017

    de.NBI, DAIS & KNIME Hackathon https://tess.oerc.ox.ac.uk/events/de-nbi-dais-knime-hackathon 2017-09-20 09:00:00 UTC 2017-09-29 00:00:00 UTC [] [] [] [] []
  • Basic Course in SEM and TEM, 1 ECTS

    20 - 22 September 2017

    Umeå

    Basic Course in SEM and TEM, 1 ECTS https://tess.oerc.ox.ac.uk/events/basic-course-in-sem-and-tem-1-ects-fd57a6bf-4418-474d-9543-cdedc0d97e3e 2017-09-20 09:00:00 UTC 2017-09-22 00:00:00 UTC Umeå Umeå [] [] workshops_and_courses [] []
  • Executive Masters in Management of Research Infrastructures

    20 September 2017 - 15 March 2019

    Milan, Italy

    Elixir node event
    Executive Masters in Management of Research Infrastructures https://tess.oerc.ox.ac.uk/events/executive-masters-in-management-of-research-infrastructures This Masters development programme is aimed at current Research Infrastructures managers and leaders who wish to develop the competencies required to meet the needs of Research Infrastructures in the planning, construction and operation phases. 2017-09-20 12:00:00 UTC 2019-03-15 12:00:00 UTC University of Milano-Bicocca, Milan, Italy University of Milano-Bicocca Milan Italy 20126 [] Claire Johnson [] [] [] []
  • Ensembl Bite-Sized September 2017

    20 September 2017

    Cambridge, United Kingdom

    Elixir node event
    Ensembl Bite-Sized September 2017 https://tess.oerc.ox.ac.uk/events/ensembl-bite-sized-september-2017 Work with the Ensembl team to get to grips with the Ensembl browser and data. 2017-09-20 12:00:00 UTC 2017-09-20 12:00:00 UTC European Bioinformatics Institute (EMBL-EBI) - Training Room 2, Cambridge, United Kingdom European Bioinformatics Institute (EMBL-EBI) - Training Room 2 Cambridge United Kingdom CB10 1SD [] Benjamin Moore [] [] [] []
  • ELIXIR Webinar on ELIXIR Data Platform

    20 September 2017

    ELIXIR Webinar on ELIXIR Data Platform https://tess.oerc.ox.ac.uk/events/elixir-webinar-on-elixir-data-platform Representatives from the ELIXIR Data Platform will present a webinar on ongoing activities. ELIXIR Webinars usually take place every third Wednesday of the month 15.00 CEST and are open for anyone to join. Upcoming webinars. 2017-09-20 14:00:00 UTC 2017-09-20 15:00:00 UTC [] [] [] [] []
  • ELIXIR Webinar: The ELIXIR Core Data Resources - selection process and outcomes.

    20 September 2017

    ELIXIR Webinar: The ELIXIR Core Data Resources - selection process and outcomes. https://tess.oerc.ox.ac.uk/events/elixir-webinar-the-elixir-core-data-resources-selection-process-and-outcomes This summer saw the publication of the first list of ELIXIR Core Data Resources - data resources of fundamental importance to the life science community and the long-term preservation of biological data.  As part of this process, ELIXIR also compiled a list of databases that it recommends for the deposition of experimental data. The purpose of this list is to provide guidance to journals and funders on the appropriate repositories in which to publish open data in the life sciences.  The webinar will describe the framework for the selection of the ELIXIR Core Data Resources and Deposition Databases, themes that developed during the selection process, and the next steps for the future development of this work. ELIXIR Webinars usually take place every third Wednesday of the month 15.00 CEST and are open for anyone to join. Upcoming webinars. 2017-09-20 14:00:00 UTC 2017-09-20 15:00:00 UTC [] [] [] [] []
  • Fortran Programming for Scientific Computing @ CSC

    21 - 22 September 2017

    Fortran Programming for Scientific Computing @ CSC https://tess.oerc.ox.ac.uk/events/fortran-programming-for-scientific-computing-csc WAITING LIST ANNOUNCEMENT Thank you to those of you who have already registered for our training course! The course is now FULLY BOOKED! So if you have registered to this course and you are not able to attend, please CANCEL your registration in advance by sending an email to patc at csc.fi. We are now opening a waiting list.  If you wish to be added to the waiting list please contact to patc at csc.fi. You will be notified via e-mail of your position on the waiting list. We will keep you further informed of whether you are enrolled into the course or not. Please note that the waiting list is handled on a first come/first serve basis. Welcome to the course! Description The Fortran programming language is still - despite of its long history - one of the standard and most useful languages in scientific computing. Our course will give the participants the basic knowledge on the Fortran 95 programming language as well as some glimpses on the Fortran 2003/2008 standards and their new features. Best practices for obtaining high performance with Fortran will also be discussed. Both days include lectures and practical hands-on exercises. Learning outcome After this course you should be able to write simple programg using the Fortran language. Prerequisites Basic knowledge on programming in general is recommended. Agenda Day 1, Thursday 21.9    09.00 – 09.45 Getting started with Fortran    09.45 – 10.15 Exercises    10.15 – 10.30 Coffee break    10.30 – 11.00 Procedures & modules    11.00 – 12.00 Exercises    12.00 – 13.00 Lunch    13.00 – 13.30 Fortran arrays    13.30 – 14.00 Exercises    14.00 – 14.30 Fortran arrays cont'd    14.30 – 14.45 Coffee break    14.45 – 15.45 Exercises    15.45 – 16.00 Summary of the first day & exercises walk-trough Day 2, Friday 22.9    09.00 – 09.45 Input/Output    09.45 – 10.30 Exercises    10.30 – 10.45 Coffee break    10.45 – 11.15 Derived types    11.15 – 12.00 Exercises    12.00 – 13.00 Lunch    13.00 – 13.45 Other useful features    13.45 – 14.30 Exercises    14.30 – 14.45 Coffee break    14.45 – 15.45 Exercises    15.45 – 16.00 Summary of the second day & exercises walk-trough Lecturers:  Sami Ilvonen (CSC), Martti Louhivuori (CSC)   Language:  EnglishPrice:          Free of charge https://events.prace-ri.eu/event/625/ 2017-09-21 06:00:00 UTC 2017-09-22 13:00:00 UTC [] [] workshops_and_courses [] []
  • Electronic Lab Notebook Introduction - Leuven

    21 September 2017

    Leuven, Belgium

    Elixir node event
    Electronic Lab Notebook Introduction - Leuven https://tess.oerc.ox.ac.uk/events/electronic-lab-notebook-introduction-leuven This training is an introduction to the Electronic Laboratory Notebook (ELN) implemented at VIB. This training is intended for all new VIB researchers and will teach you the basic knowledge required to successfully document in ELN. The training consists of two parts: Introduction: Access​ ways to your notebook, ELN installation instructions and house rules, where to find documentation and get support Hands-on-demo: Creating notebooks/experiments, importing and exporting (MS Office) files, sharing data, using templates, advanced searching, printing, tips and tricks This training is mandatory for all new VIB co-workers and requires an active VIB account. In order to check your username and password, go to https://storefront.vib.be, if login fails send an e-mail to eln*Replace*With*At*Sign*vib.be. People who want to join this training can register here! 2017-09-21 10:00:00 UTC 2017-09-21 12:00:00 UTC VIB Bioinformatics Core O&N4 room 07.339 Campus Gasthuisberg, Leuven, Belgium O&N4 room 07.339 Campus Gasthuisberg Leuven Belgium 3000 [] [] [] [] []
  • Basic statistics theory

    22 September 2017

    Leuven, Belgium

    Elixir node event
    Basic statistics theory https://tess.oerc.ox.ac.uk/events/basic-statistics-theory After this basic statistics theory session, you should be able to: Understand basic statistical concepts and methods for statistical analysis of life sciences data Choose the correct statistical test for analyzing your data This training gives an introduction to the use of statistics for basic analyses of life sciences data. This training is a prerequisite introduction to a series of hands-on trainings on the statistical analysis of life sciences data: 'Basic statistics in R' and 'Basic statistics in Graphpad Prism'. If you want to follow one of these trainings, you have to follow this introduction. Ít will give you all the theoretical background that you need. Those that already have a strong statistical background may register directly for the 'Basic statistics in R, part II' training. No skills required.  9h30-12h30: Theoretical background 2017-09-22 09:30:00 UTC 2017-09-22 16:30:00 UTC VIB Bioinformatics Core Park Inn by Radisson Leuven, Leuven, Belgium Park Inn by Radisson Leuven Leuven Belgium 3010 [] [] [] [] []
  • Translational Medicine 2017

    24 - 26 September 2017

    Czech Republic

    Translational Medicine 2017 https://tess.oerc.ox.ac.uk/events/translational-medicine-2017 Translational Medicine 2017 is the third bi-annual conference organised by EATRIS (European Infrastructure for Translational Medicine). This event will bring together experts and key actors in translational research, to discuss current approaches and future perspectives in the field. The theme of the 2017 edition is “Enhancing Predictivity in Medicines Development” and will focus on the latest approaches to increase chances of success in drug development, from novel in vitro systems to new biomarkers or clinical trial methodology for patient selection and stratification. 2017-09-24 10:00:00 UTC 2017-09-26 17:00:00 UTC Czech Republic Czech Republic [] [] meetings_and_conferences [] []
  • de.NBI Late Summer School 2017 - Computational genomics and RNA biology

    25 - 29 September 2017

    de.NBI Late Summer School 2017 - Computational genomics and RNA biology https://tess.oerc.ox.ac.uk/events/de-nbi-late-summer-school-2017-computational-genomics-and-rna-biology 2017-09-25 09:00:00 UTC 2017-09-29 00:00:00 UTC [] [] [] [] []
  • PLANT 2030 Summer School – Basic Bioinformatics training for Biologists

    25 - 27 September 2017

    PLANT 2030 Summer School – Basic Bioinformatics training for Biologists https://tess.oerc.ox.ac.uk/events/plant-2030-summer-school-basic-bioinformatics-training-for-biologists 2017-09-25 09:00:00 UTC 2017-09-27 00:00:00 UTC [] [] [] [] []
  • OpenMS User Meeting 2017

    25 - 27 September 2017

    OpenMS User Meeting 2017 https://tess.oerc.ox.ac.uk/events/openms-user-meeting-2017 2017-09-25 09:00:00 UTC 2017-09-27 00:00:00 UTC [] [] [] [] []
  • SeqAn User Meeting 2017

    25 - 27 September 2017

    SeqAn User Meeting 2017 https://tess.oerc.ox.ac.uk/events/seqan-user-meeting-2017 2017-09-25 09:00:00 UTC 2017-09-27 00:00:00 UTC [] [] [] [] []
  • 3GB-TEST Next-Generation Sequencing Course

    25 - 27 September 2017

    Ljubljana, Slovenia

    Elixir node event
    3GB-TEST Next-Generation Sequencing Course https://tess.oerc.ox.ac.uk/events/3gb-test-next-generation-sequencing-course A 3-day course on NGS Ljubljana, Slovenia in the period of 25-27 October 2017. The focus of the course is on clinical diagnostics using exome/genome sequences, variant identification and analysis including afternoon practical sessions.   Course page: http://3gb-test.eu/ The post 3GB-TEST Next-Generation Sequencing Course appeared first on Dutch Techcentre for Life Sciences. 2017-09-25 09:00:00 UTC 2017-09-27 00:00:00 UTC Ljubljana, Slovenia, Ljubljana, Slovenia Ljubljana, Slovenia Ljubljana Slovenia [] [] workshops_and_courses [] []
  • Data management with iRODS

    25 September 2017

    SURFsara, Amsterdam

    Elixir node event
    Data management with iRODS https://tess.oerc.ox.ac.uk/events/data-management-with-irods iRODS is a datamanagement middleware that is gaining more and more popularity. The workshop will introduce this technology in general and will focus on the usage of iRODS. Date: 25 September 2017 Course goal: Participants will learn about the concept… The post Data management with iRODS appeared first on Dutch Techcentre for Life Sciences. 2017-09-25 09:00:00 UTC 2017-09-25 00:00:00 UTC SURFsara, Amsterdam, SURFsara, Amsterdam SURFsara, Amsterdam SURFsara Amsterdam [] [] workshops_and_courses [] []
  • Pattern Recognition course

    25 - 29 September 2017

    Amsterdam, Netherlands

    Elixir node event
    Pattern Recognition course https://tess.oerc.ox.ac.uk/events/pattern-recognition-course After having followed this course, the student has a good understanding of basic pattern recognition and machine learning techniques and is able to recognize what method is most applicable to data analysis problems (s)he encounters in bioinformatics applications. Date: September 25-29,… The post Pattern Recognition course appeared first on Dutch Techcentre for Life Sciences. 2017-09-25 09:00:00 UTC 2017-09-29 00:00:00 UTC Amsterdam, Netherlands, Amsterdam, Netherlands Amsterdam, Netherlands Amsterdam Netherlands [] [] workshops_and_courses [] []
  • Introduction to Bioinformatics using NGS data, 2 hp

    25 - 29 September 2017

    Lund

    Introduction to Bioinformatics using NGS data, 2 hp https://tess.oerc.ox.ac.uk/events/introduction-to-bioinformatics-using-ngs-data-2-hp-93910d63-07c7-4501-be01-ed5195bb965e 2017-09-25 09:00:00 UTC 2017-09-29 00:00:00 UTC Lund Lund [] [] workshops_and_courses [] []
  • Systems Workshop: Programming MareNostrum 4 @ BSC

    26 - 27 September 2017

    Systems Workshop: Programming MareNostrum 4 @ BSC https://tess.oerc.ox.ac.uk/events/systems-workshop-programming-marenostrum-iii-bsc-fef03938-5174-4260-9225-c6c95a631f8a The registration to this course is now open. Please, bring your own laptop.  All the PATC courses at BSC are free of charge. Course convener: David Vicente  Objectives: The objective of this course is to present to potential users the new configuration of MareNostrum and a introduction on how to use the new system (batch system, compilers, hardware, MPI, etc).Also It will provide an introduction about RES and PRACE infrastructures and how to get access to the supercomputing resources available. Learning Outcomes: The students who finish this course will know the internal architecture of the new MareNostrum, how it works, the ways to get access to this infrastructure and also some information about optimization techniques for its architecture. Level: INTERMEDIATE -for trainees with some theoretical and practical knowledge; those who finished the beginners course. Prerequisites:  Any potential user of a HPC infrastructure will be welcome Agenda: DAY 1 09:00 Introduction to BSC, PRACE PATC and this training - David Vicente 09:30 MareNostrum 4 – the view from System administration group - Javier Bartolomé 10:30 Coffee break 11:00 Visualization at BSC - Carlos Tripiana 11:30 How to use MareNostrum 4: BASIC Things, BATCH system, Filesystems, Compilers, Modules, DT, DL, BSC commands - Miguel Bernabeu, Borja Arias 12:15 Hands-on I - Miguel Bernabeu, Borja Arias 13:00 Lunch (not hosted) 14:30 How to use MN3 – Advanced I MPI implementations (PR), MPI IO (PR), Tuning MPI values for different applications (DV)  - Pablo Ródenas, Janko Strassburg, David Vicente 15:15 Hands-on II - Pablo Ródenas, David Vicente 16:00 Coffee break 16:15 How to use MN4 – Advanced II GREASY (PR), MIC (JR), Mathematical libraries MKL (JR) - Pablo Ródenas, Jorge Rodríguez 17:00 End of the first day DAY 2 09:00 You choose! - MareNostrum 4 visit (In the chapel) - Doubts + Hands ON + Tunning your app (In the classroom) - David Vicente, Jorge Rodríguez 09:30 How can I get resources from you? - RES Jorge Rodríguez 10:00 How can I get Resources from you? - PRACE Janko Strassburg 10:30 Coffee break 11:00 Use case: Genomics - Miguel Bernabeu 11:25 Tuning applications   BSC performance tools (Extrae and Paraver) - BSC Tools Team 12:00 Hands-on III – Performance tools and tunning your application - BSC Tools Team 13:00 Wrap-up : Can we help you in your porting ? How ? when ? - David Vicente   13:30 END of COURSE https://events.prace-ri.eu/event/534/ 2017-09-26 08:00:00 UTC 2017-09-27 11:30:00 UTC [] [] workshops_and_courses [] []

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